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Brain Data Analysis Methods Brain Data Analysis Methods 1

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Instructors & Organizers Instructors & Organizers 2

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Tutorials Tutorials 3

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Projects Projects 4

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Project submission guide Project submission guide 5

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Technical Help Technical Help 6

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Discord guide Discord guide 7

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Github guide Github guide 8

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Windows Installation Guide Windows Installation Guide 9

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NTUCOOL & ee-class NTUCOOL & ee-class 10

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Links Links 11

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External Tool

Week 1 - Introduction Week 1 - Introduction 12

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Week 1 - Introduction (full Future Classroom version) Week 1 - Introduction (full Future Classroom version) 13

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Tutorials

Tutorials Tutorials

Context Module Sub Header

Data Science 1

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External Url

Installation Installation 2

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External Url

BASH BASH 3

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Introduction to the terminal (Bash) Introduction to the terminal (Bash) 4

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External Url

Using git and github Using git and github 5

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External Tool

Introduction to Git and GitHub Introduction to Git and GitHub 6

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External Url

Introduction to Python for data analysis Introduction to Python for data analysis 7

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External Tool

Python for data analysis Python for data analysis 8

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External Url

Machine learning basics Machine learning basics 9

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External Tool

Introduction to machine learning (Part 1) Introduction to machine learning (Part 1) 10

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External Url

Project Management Project Management 11

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External Tool

Standards for project management and organization Standards for project management and organization 12

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External Url

High performance computing High performance computing 13

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External Tool

High performance computing High performance computing 14

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External Url

Open data Open data 15

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Open data resources (and how to download them) Open data resources (and how to download them) 16

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External Url

Writing scipts in python Writing scipts in python 17

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External Tool

How to make scripts in python How to make scripts in python 18

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External Url

Introduction to deep learning Introduction to deep learning 19

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Fundamentals of deep learning in neuroscience Fundamentals of deep learning in neuroscience 20

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External Url

Research data management using DataLad Research data management using DataLad 21

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External Tool

Day 2 - An introduction to Datalad Day 2 - An introduction to Datalad 22

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External Url

Introduction to data visualization in Python Introduction to data visualization in Python 23

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External Tool

Introduction to data visualization in Python Introduction to data visualization in Python 24

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External Url

Introduction to python packaging with 'pipy' Introduction to python packaging with 'pipy' 25

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External Tool

An Introduction to Python Packaging An Introduction to Python Packaging 26

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External Url

Software testing and continuous integration Software testing and continuous integration 27

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Software Testing and Continuous Integration Software Testing and Continuous Integration 28

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External Url

Containers Containers 29

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External Tool

Understanding containers and how to use them Understanding containers and how to use them 30

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Context Module Sub Header

Neuro Data Science 31

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External Url

Applications of deep learning in neuroimaging Applications of deep learning in neuroimaging 32

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External Tool

Applications of deep learning in neuroimaging (Nobrainer) Applications of deep learning in neuroimaging (Nobrainer) 33

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External Url

Machine learning for neuroimaging Machine learning for neuroimaging 34

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External Tool

Introduction to machine learning (Part 2 - Hands-on tutorial) Introduction to machine learning (Part 2 - Hands-on tutorial) 35

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External Url

fMRI connectivity fMRI connectivity 36

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External Tool

Introduction to functional MRI connectivity Introduction to functional MRI connectivity 37

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External Url

fMRI Parcellation fMRI Parcellation 38

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External Tool

Introduction to brain parcellation (fMRI) Introduction to brain parcellation (fMRI) 39

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External Url

The brain imaging data standards and applications The brain imaging data standards and applications 40

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External Tool

Tools for project management and organization - BIDS Ecosystem Tools for project management and organization - BIDS Ecosystem 41

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External Url

Working with MNE-Python and EEG-BIDS Working with MNE-Python and EEG-BIDS 42

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External Tool

Working with MNE-Python and EEG BIDS Working with MNE-Python and EEG BIDS 43

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External Url

Neuroimaging data and file structures in Python Neuroimaging data and file structures in Python 44

external_url 1895278 0

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External Tool

Neurohackademy: Chris Markiewicz - NiBabel: Neuroimaging data and file structures in Python Neurohackademy: Chris Markiewicz - NiBabel: Neuroimaging data and file structures in Python 45

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External Url

Introduction to dMRI Introduction to dMRI 46

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External Tool

dMRI analysis in Python dMRI analysis in Python 47

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External Url

Introduction to spinal cord MRI analysis Introduction to spinal cord MRI analysis 48

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External Tool

2023 Spinal Cord Toolbox Course 2023 Spinal Cord Toolbox Course 49

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